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Journal: Frontiers in Microbiology
Article Title: Transcriptional Changes Underlying Elemental Stoichiometry Shifts in a Marine Heterotrophic Bacterium
doi: 10.3389/fmicb.2012.00159
Figure Lengend Snippet: Schematic of microarray data analysis . Probe counts are shown in italicized font and gene counts are in bold font. (A) Significant Analysis of Microarray (SAM) was used to analyze the microarray data (pairwise SAM comparisons with 5,000 permutations and a false discovery rate ≤ 2%). From these results, probes significantly different in all three comparisons to the other treatments (that is, falling into the three-way overlap region of each Venn diagram) were selected for further analyses. (B) From the normalized fluorescence values, the fold-change for each probe was calculated as the median value between all limitation-to-excess pairwise comparisons and genes whose fold-change was ≥ 3 were retained.
Article Snippet: The
Techniques: Microarray, Fluorescence